BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C04LP1|AL424928
(985 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1841 0.0
>3x_Contig1741
Length = 21706
Score = 1841 bits (927), Expect = 0.0
Identities = 972/983 (98%), Gaps = 4/983 (0%)
Strand = Plus / Minus
Query: 1 acgctatcaagtcacgtgttgatcaattaaacttgaacttgacagatgatcaagtcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11410 acgctatcaagtcacgtgttgatcaattaaacttgaacttgacagatgatcaagtcaaag 11351
Query: 61 aagtaaccgctaagattaagaagcttggtgacatcagacccctaaatatcgatgatgtcg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11350 aagttaccgctaagattaagaagcttggtgacatcagacccctaaatatcgatgatgtcg 11291
Query: 121 actccatcatcaaggacttccatgctgaagtatctacgccgcaattgagagcagtaagaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 11290 actccatcatcaaggacttccatgctgaagtatctacgccgcaattgagagctgtaagaa 11231
Query: 181 gagatgacaacgacgtcaatgacattgatatccaagagccatccaacaagaaaaccaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11230 gagatgacaacgacgtcaatgacattgatatccaagagccatccaacaagaaaaccaagg 11171
Query: 241 tagagtaaaccttaagaaaggaaataaacataaaagtactagaaagctcataagacaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11170 tagagtaaaccttaagaaaggaaataaacataaaagtactagaaagctcataagacaagt 11111
Query: 301 gtaacttcttctttttgcctcgttccaccaagtaccttgcttttattcacgtttatgtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11110 gtaacttcttctttttgcctcgttccaccaagtaccttgcttttattcacgtttatgtca 11051
Query: 361 aactacatttctctcatccatatattaagtatcttagtaatttattatagtaactcaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11050 aactacatttctctcatccatatattaagtatcttagtaatttattatagtaactcaatc 10991
Query: 421 tgacacgcacaataaaaggcgctcaaacacaggccgcaagaaataaaaacttgtgcagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10990 tgacacgcacaataaaaggcgctcaaacacaggccgcaagaaataaaaacttgtgcagat 10931
Query: 481 aacagacggctggtatatatgcttactctcatttcttttgatgtattttctctggagtaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10930 aacagacggctggtatatatgcttactctcatttcttttgatgtattttctctggagtaa 10871
Query: 541 aaacagatggaataagccgggaagcaggacatattccgttcaaaaagaaagaccccagtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10870 aaacagatggaataagccgggaagcaggacatattccgttcaaaaagaaagaccccagtt 10811
Query: 601 ctgacatgagaaactaataaatactaacagtaactaaatgggagcccgaatccaccgcaa 660
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10810 ctgacatgagacactaataaatactaacagtaactaaatgggagcccgaatccaccgcaa 10751
Query: 661 ccgacaagacattattaagggtccggaaggagacttgacactatgtcactactttcatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10750 ccgacaagacattattaagggtccggaaggagacttgacactatgtcactactttcatca 10691
Query: 721 tatataacgccattcttccatcactaaattcaagcctccctaaccaatcaggttctttag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10690 tatataacgccattcttccatcactaaattcaagcctccctaaccaatcaggttctttag 10631
Query: 781 tgttctctttttcacacacatttttttttgtcaaaaagtttcaccaaaaaaatggggaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10630 tgttctctttttcacacacatttttttttgtcaaaaagtttcaccaaaaaaat-gggaaa 10572
Query: 841 aaatataaaaggaaaagaagaacctagttccccttgaaacacacatgtcttaacgarg-g 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 10571 aaatataaaaggaaaagaagaacctagttccccttgaaacacacatgtcttaacgaagtg 10512
Query: 900 wgcccggaactgaaggattgatcacataatttgcgtmagttacagttagactagat-aaa 958
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 10511 ggcccggaactgaaggattgatcacataatttgcgtcagttacagttagactagataaaa 10452
Query: 959 agtttt-accaagaatacacaaa 980
|||||| || |||||||||||||
Sbjct: 10451 agttttaacaaagaatacacaaa 10429
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8723
Number of Sequences: 1807
Number of extensions: 8723
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)